Individual software packages for nanoscale modeling availiable on the market are tailored to study a wide range of systems and to calculate a variety of their properties. The increasing number of such packages leads to a vast amount of ways to run simulations; often a combination of different software is a must to have thing. As each software requires specialized training, the simulation setup becomes increasingly complex. VIKING includes a number of designed tasks that eliminate this complexity and include the possibility to study:
Advanced atomic properties
- Atomic charges
- Polarizabilities
- Nuclear shielding tensors
- Electronic excitations
- Atomic orbitals
Quantum chemistry
- Chemical reactions
- Molecular properties
- Chemical and electronic structure
- Electronic excitations
- Molecular orbitals
- Radical pair dynamics
Molecular dynamics
- All-atom molecular dynamics simulations
- Energy minimization and equilibration
- A wide range of analysis tools
- Varied statistical ensembles
- Free energy perturbation
- Reactive force field
Drug discovery
- Molecular docking
- Virtual screening
Molecular spectroscopy
- Infrared spectroscopy
- UV spectroscopy
- Raman spectroscopy
- Circular dichroism spectra
- Molecular vibrations
Supramolecular assemblies
- Interaction of macromolecules at the nanoscale
- Protein/membrane/DNA assemblies
- Molecular mechanisms of enzymatic activity
Genome editing studies
ProfileIt™ INDEL profiling tool (trademark of
COBO Technologies™).
- Processing of files produced by genetic analyzing devices
- Visualization of sample profiles
- INDEL profiling (statistics & publication-quality images)
- Individual peak analysis